Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
AAO58400.1Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer. (150 aa)    
Predicted Functional Partners:
AAO58401.1
mutT/nudix family protein; See PMID:20190049 for expression data.
 
  
 0.958
AAO58402.1
Lipoprotein, putative.
 
     0.780
rmf
Ribosome modulation factor-related protein; During stationary phase, converts 70S ribosomes to an inactive dimeric form (100S ribosomes); Belongs to the ribosome modulation factor family.
  
     0.725
cpdA-2
Ser/Thr protein phosphatase; Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes.
 
  
 0.705
algQ
Transcriptional regulator AlgQ; See PMID:20190049 for expression data; Belongs to the Rsd/AlgQ family.
  
     0.699
AAO56988.1
Conserved protein of unknown function; Identified by Glimmer2; putative; see PMID:20190049 for expression data; identified by Glimmer.
  
   
 0.672
AAO58392.1
Conserved protein of unknown function; See PMID:20190049 for expression data; similar to SP:P36653; identified by sequence similarity; putative.
 
     0.590
AAO53697.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
  
     0.579
sdhE
Conserved protein of unknown function; An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH and other flavinylated proteins a [...]
  
     0.571
AAO55848.1
Conserved protein of unknown function; See PMID:20190049 for expression data; similar to GP:9949137, and GP:9949137; identified by sequence similarity; putative.
  
     0.568
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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