Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AAO58403.1Cytosine/purine/uracil/thiamine/allantoin permease family protein; See PMID:20190049 for expression data. (429 aa)    
Predicted Functional Partners:
thiC
Thiamin biosynthesis protein ThiC; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction.
     
 0.758
AAO58008.1
Outer membrane porin, OprD family; Similar to GP:9950741, and SP:P32722; identified by sequence similarity; putative.
  
     0.545
pyrB
Aspartate carbamoyltransferase; See PMID:20190049 for expression data; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
   
    0.508
pyrC
Dihydroorotase, homodimeric type; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate.
   
    0.498
carA
Carbamoyl-phosphate synthase, small subunit; See PMID:20190049 for expression data; Belongs to the CarA family.
   
    0.498
carB
Carbamoyl-phosphate synthase, large subunit; See PMID:20190049 for expression data.
   
    0.494
AAO58445.1
Bifunctional putA protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
   
  
 0.440
AAO53913.1
Outer membrane porin, OprD family; Similar to GP:2645844, and SP:P32722; identified by sequence similarity; putative.
  
     0.437
AAO54524.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
  
     0.427
AAO58996.1
Conserved domain protein.
  
     0.421
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.