Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AAO58405.1Outer membrane efflux protein TolC, putative; See PMID:20190049 for expression data. (479 aa)    
Predicted Functional Partners:
AAO57754.1
Efflux transporter, RND family, MFP subunit; See PMID:20190049 for expression data; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.934
saxB-2
Isothiocyanate resistance protein SaxB; See PMID:21385714; see PMID:20190049 for expression data.
  
 0.923
AAO54363.1
Efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.882
AAO54362.1
AcrB/AcrD/AcrF family protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 
 0.851
AAO58618.1
Efflux transporter, RND family, MFP subunit; See PMID:20190049 for expression data; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.794
AAO56778.1
Efflux transporter, RND family, MFP subunit; Identified by match to TIGR protein family HMM TIGR00998; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.781
AAO58619.1
Efflux transporter, RND family, MFP subunit; See PMID:20190049 for expression data; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.779
AAO57217.1
Multidrug resistance protein.
 
 
 0.772
AAO56779.1
Efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.765
AAO54833.1
HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.754
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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