Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AAO58407.1Multidrug resistance protein. (110 aa)    
Predicted Functional Partners:
AAO58408.1
Oxidoreductase, FAD-binding protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF01266.
       0.808
AAO54363.1
Efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
     
 0.801
AAO58410.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
       0.766
AAO54362.1
AcrB/AcrD/AcrF family protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
      
 0.696
AAO58409.1
Oxidoreductase, aldo/keto reductase family; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01293.
       0.680
AAO58405.1
Outer membrane efflux protein TolC, putative; See PMID:20190049 for expression data.
      
 0.671
kdtA
3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.
       0.640
AAO57364.1
Sodium/bile acid symporter family protein; Identified by match to TIGR protein family HMM TIGR00832.
     
 0.633
AAO56545.1
Transcriptional regulator, AraC family; Identified by match to TIGR protein family HMM TIGR01382.
     
 0.629
AAO54806.1
Conserved protein of unknown function; See PMID:20190049 for expression data.
      
 0.623
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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