Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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AAO58408.1Oxidoreductase, FAD-binding protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF01266. (391 aa)    
Predicted Functional Partners:
AAO58409.1
Oxidoreductase, aldo/keto reductase family; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01293.
 
  
 0.967
AAO58410.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
       0.823
AAO58407.1
Multidrug resistance protein.
       0.808
AAO55736.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
  
   
 0.754
kdtA
3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.
  
    0.740
AAO54724.1
Conserved protein of unknown function; Similar to GB:M60091, GB:L46359, GB:L46360, GB:L46361, GB:L46362, GB:L48713, GB:L48715, GB:L48716, SP:P07902, PID:1066737, PID:1066749, PID:1066751, PID:1066753, PID:182951, PID:306759, PID:950351, PID:950353, PID:950355, PID:950357, PID:950365, PID:950367, PID:950369, PID:950377, PID:950381, PID:950383, PID:950391, PID:950393, PID:950395, PID:950397, PID:950399, PID:950401, PID:950403, and PID:950405; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to GB:M60091, GB:L46359, GB:L46360, GB:L46361, GB:L4636 [...]
  
     0.738
AAO58937.1
Conserved protein of unknown function; See PMID:20190049 for expression data; similar to GP:9951865; identified by sequence similarity; putative.
  
     0.737
AAO56706.1
Conserved protein of unknown function; See PMID:20190049 for expression data; similar to GP:9951865; identified by sequence similarity; putative.
  
     0.730
AAO57325.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
  
   
 0.718
AAO58417.1
Conserved hypothetical protein; Identified by match to PFAM protein family HMM PF02585.
  
     0.701
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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