Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
waaPLipopolysaccharide core biosynthesis protein WaaP; Catalyzes the phosphorylation of heptose(I) of the outer membrane lipopolysaccharide core; Belongs to the protein kinase superfamily. KdkA/rfaP family. (268 aa)    
Predicted Functional Partners:
waaG
Lipopolysaccharide core biosynthesis protein WaaG; See PMID:20190049 for expression data; similar to GB:X55137; identified by sequence similarity; putative.
 
 
 0.999
waaC
Lipopolysaccharide heptosyltransferase; See PMID:20190049 for expression data; similar to SP:P24173; identified by sequence similarity; putative.
 
 
 0.999
rfaF
ADP-heptose--LPS heptosyltransferase II; See PMID:20190049 for expression data; similar to SP:P37692, GB:U14003, SP:P39352, PID:537120, GB:U00096, and PID:1790730; identified by sequence similarity; putative.
 
 
 0.997
AAO58426.1
Lipopolysaccharide biosynthesis protein, putative; See PMID:20190049 for expression data; similar to GP:4323000; identified by sequence similarity; putative.
 
 
 0.994
AAO58425.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
 
 
 0.976
AAO58427.1
Lipopolysaccharide core biosynthesis protein, putative; See PMID:20190049 for expression data; similar to GP:3482880; identified by sequence similarity; putative.
 
     0.970
kdtA
3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.
    
 0.961
inaA
inaA protein; See PMID:20190049 for expression data; similar to SP:P27294; identified by sequence similarity; putative.
 
 
 0.949
AAO58420.1
Carbamoyltransferase family protein; See PMID:20190049 for expression data.
 
  
 0.928
AAO58419.1
Glycosyl transferase, group 1 family protein; See PMID:20190049 for expression data.
 
   
 0.796
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.