Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AAO58592.1Membrane protein, putative; Identified by match to TIGR protein family HMM TIGR01770. (939 aa)    
Predicted Functional Partners:
AAO58593.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
 
  
 0.991
AAO57365.1
Acyltransferase family protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF03209.
 
   
 0.790
fbp
Fructose-1,6-bisphosphatase; Similar to SP:P19911; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to SP:P19911, identified by sequence similarity, putative.
       0.744
cdsA-2
Phosphatidate cytidylyltransferase; Identified by match to PFAM protein family HMM PF01148.
      
 0.636
AAO58868.1
Conserved hypothetical protein; Identified by match to TIGR protein family HMM TIGR01738.
  
     0.609
AAO56421.1
DnaJ domain protein; Identified by match to PFAM protein family HMM PF00226.
  
     0.578
AAO54144.1
Conserved hypothetical protein; Identified by match to PFAM protein family HMM PF04241.
  
     0.562
AAO57770.1
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
    0.542
AAO57771.1
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
    0.501
glgP
Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
       0.495
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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