STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAO58685.1Sco1/SenC family protein. (210 aa)    
Predicted Functional Partners:
ctaG
Cytochrome c oxidase assembly protein.
 
 
 0.846
AAO58310.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF04314.
 
   
 0.738
AAO55279.1
Conserved hypothetical protein; Similar to SP:P07779, GB:X06452, and PID:38742; identified by sequence similarity; putative.
 
 
 0.672
cyoA
Cytochrome o ubiquinol oxidase, subunit II; See PMID:20190049 for expression data.
  
 
 0.669
AAO55208.1
Thioredoxin, putative; See PMID:20190049 for expression data.
 
 
 0.636
ccoP
Cytochrome c oxidase, cbb3-type, subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
 
  
 0.611
AAO56347.1
Conserved protein of unknown function; See PMID:20190049 for expression data; similar to GP:17427046; identified by sequence similarity; putative.
 
   
 0.596
dsbE
Thiol:disulfide interchange protein DsbE.
 
 
 0.583
AAO56113.1
Conserved protein of unknown function; See PMID:20190049 for expression data; similar to GP:17427046; identified by sequence similarity; putative.
 
   
 0.556
AAO58683.1
Protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
 
     0.485
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.