STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fadH2,4-dienoyl-CoA reductase; Similar to GP:9716173, and SP:P42593; identified by sequence similarity; putative. (679 aa)    
Predicted Functional Partners:
gltB
Glutamate synthase, large subunit; See PMID:20190049 for expression data.
  
 
 0.999
AAO57789.1
Oxidoreductase, iron-sulfur-binding protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00970.
  
 0.959
AAO58666.1
Oxidoreductase, iron-sulfur-binding protein; See PMID:20190049 for expression data.
  
 0.959
etfB-1
Electron transfer flavoprotein, beta subunit.
  
 
 0.900
etfB-2
Electron transfer flavoprotein, beta subunit; Similar to GP:15075667, SP:P38975, and SP:P38975; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to GP:15075667, SP:P38975, and SP:P38975, identified by sequence similarity, putative.
  
 
 0.894
fadB
Fatty oxidation complex, alpha subunit; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family.
 
  
 0.879
AAO56089.1
Glutamate synthase family protein; Similar to GP:15159030; identified by sequence similarity; putative; Belongs to the glutamate synthase family.
  
 
 0.862
AAO56087.1
Glutamine amidotransferase, class-II protein; Similar to GP:3687682; identified by sequence similarity; putative.
  
 
 0.845
AAO56088.1
Conserved hypothetical protein; Similar to GP:15159031, and SP:O87391; identified by sequence similarity; putative.
  
 
 0.845
etfA-1
Electron transfer flavoprotein, alpha subunit.
   
 
 0.804
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.