| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AAO55778.1 | greB-1 | PSPTO_2264 | PSPTO_2265 | Hypothetical protein; Identified by Glimmer2; putative. | Transcription elongation factor GreB; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length. | 0.645 |
| AAO55782.1 | greB-1 | PSPTO_2268 | PSPTO_2265 | acyl-CoA thioesterase I; See PMID:20190049 for expression data. | Transcription elongation factor GreB; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length. | 0.592 |
| AAO56962.1 | greB-1 | PSPTO_3487 | PSPTO_2265 | dnaK suppressor protein, putative; Similar to SP:P18274; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to SP:P18274, identified by sequence similarity, putative. | Transcription elongation factor GreB; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length. | 0.759 |
| AAO56962.1 | nusG | PSPTO_3487 | PSPTO_0614 | dnaK suppressor protein, putative; Similar to SP:P18274; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to SP:P18274, identified by sequence similarity, putative. | Transcription antitermination protein NusG; Participates in transcription elongation, termination and antitermination. | 0.474 |
| AAO56962.1 | rpoA | PSPTO_3487 | PSPTO_0651 | dnaK suppressor protein, putative; Similar to SP:P18274; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to SP:P18274, identified by sequence similarity, putative. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.453 |
| AAO56962.1 | rpoB | PSPTO_3487 | PSPTO_0619 | dnaK suppressor protein, putative; Similar to SP:P18274; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to SP:P18274, identified by sequence similarity, putative. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.739 |
| AAO56962.1 | rpoC | PSPTO_3487 | PSPTO_0620 | dnaK suppressor protein, putative; Similar to SP:P18274; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to SP:P18274, identified by sequence similarity, putative. | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.717 |
| AAO56962.1 | rpoZ | PSPTO_3487 | PSPTO_0074 | dnaK suppressor protein, putative; Similar to SP:P18274; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to SP:P18274, identified by sequence similarity, putative. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.857 |
| dksA | greB-1 | PSPTO_0969 | PSPTO_2265 | dnaK suppressor protein; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression. | Transcription elongation factor GreB; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length. | 0.719 |
| dksA | nusG | PSPTO_0969 | PSPTO_0614 | dnaK suppressor protein; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression. | Transcription antitermination protein NusG; Participates in transcription elongation, termination and antitermination. | 0.474 |
| dksA | rpoA | PSPTO_0969 | PSPTO_0651 | dnaK suppressor protein; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.551 |
| dksA | rpoB | PSPTO_0969 | PSPTO_0619 | dnaK suppressor protein; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.700 |
| dksA | rpoC | PSPTO_0969 | PSPTO_0620 | dnaK suppressor protein; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression. | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.665 |
| dksA | rpoZ | PSPTO_0969 | PSPTO_0074 | dnaK suppressor protein; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.874 |
| greB-1 | AAO55778.1 | PSPTO_2265 | PSPTO_2264 | Transcription elongation factor GreB; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length. | Hypothetical protein; Identified by Glimmer2; putative. | 0.645 |
| greB-1 | AAO55782.1 | PSPTO_2265 | PSPTO_2268 | Transcription elongation factor GreB; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length. | acyl-CoA thioesterase I; See PMID:20190049 for expression data. | 0.592 |
| greB-1 | AAO56962.1 | PSPTO_2265 | PSPTO_3487 | Transcription elongation factor GreB; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length. | dnaK suppressor protein, putative; Similar to SP:P18274; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to SP:P18274, identified by sequence similarity, putative. | 0.759 |
| greB-1 | dksA | PSPTO_2265 | PSPTO_0969 | Transcription elongation factor GreB; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length. | dnaK suppressor protein; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression. | 0.719 |
| greB-1 | nusG | PSPTO_2265 | PSPTO_0614 | Transcription elongation factor GreB; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length. | Transcription antitermination protein NusG; Participates in transcription elongation, termination and antitermination. | 0.691 |
| greB-1 | rnk | PSPTO_2265 | PSPTO_0229 | Transcription elongation factor GreB; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length. | Regulator of nucleoside diphosphate kinase; Similar to SP:P40679; identified by sequence similarity; putative. | 0.636 |
