Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
nfrBBacteriophage N4 adsorption protein B; Similar to SP:P31599, GB:M11717, GB:M24743, SP:P08107, PID:188488, PID:188490, PID:188530, PID:32481, PID:32483, PID:386785, and PID:639910; identified by sequence similarity; putative. (706 aa)    
Predicted Functional Partners:
AAO54720.1
Conserved hypothetical protein; Similar to GP:17430979; identified by sequence similarity; putative.
 
  
 0.981
AAO54722.1
Hypothetical protein; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family.
 
     0.968
AAO54723.1
UDP-N-acetylglucosamine 2-epimerase; Identified by match to TIGR protein family HMM TIGR00236; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
 
   
 0.854
AAO54719.1
Hypothetical protein; Identified by Glimmer2; putative.
     
 0.782
AAO56421.1
DnaJ domain protein; Identified by match to PFAM protein family HMM PF00226.
 
 
 0.491
AAO54803.1
Sensory box protein/response regulator; See PMID:20190049 for expression data.
  
  
 0.475
AAO57746.1
DnaJ domain protein; Identified by match to PFAM protein family HMM PF00226.
 
 
 0.441
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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