Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AAO58702.1Proline-specific permease proY; Similar to SP:P37460; identified by sequence similarity; putative. (458 aa)    
Predicted Functional Partners:
hutI
Imidazolonepropionase; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR00857; Belongs to the metallo-dependent hydrolases superfamily. HutI family.
  
  
 0.982
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
  
  
 0.890
AAO58704.1
Formimidoylglutamase, putative.
  
    0.888
hutH-3
Histidine ammonia-lyase; Identified by match to TIGR protein family HMM TIGR01226; Belongs to the PAL/histidase family.
  
  
 0.839
hutC
Histidine utilization repressor; Similar to GP:13195272, and SP:P22773; identified by sequence similarity; putative.
  
  
 0.687
AAO58698.1
Histidine ABC transporter, permease protein, putative.
  
  
 0.655
hutH-2
Histidine ammonia-lyase; Identified by match to TIGR protein family HMM TIGR01777.
  
  
 0.627
AAO58697.1
Histidine transporter, periplasmic histidine-binding protein.
  
  
 0.580
AAO58699.1
Histidine ABC transporter, ATP-binding protein, putative.
  
    0.533
AAO55435.1
Major facilitator family transporter; See PMID:20190049 for expression data; similar to SP:P25744, GB:L19760, SP:P13795, SP:P36974, and PID:307426; identified by sequence similarity; putative.
  
     0.479
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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