STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USH1GUSH1 protein network component sans. (469 aa)    
Predicted Functional Partners:
USH1C
USH1 protein network component harmonin.
    
 0.990
ENSACCP00020002175
annotation not available
   
 0.847
MYO7B
Myosin VIIB.
   
 0.847
MYO7A
Myosin VIIA.
   
 0.847
PLEKHH3
Pleckstrin homology, MyTH4 and FERM domain containing H3.
   
 0.755
ENSACCP00020018354
annotation not available
   
 0.755
ENSACCP00020021189
annotation not available
   
 0.755
ENSACCP00020021732
annotation not available
   
 0.755
WHRN
Whirlin.
    
 0.704
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.696
Your Current Organism:
Aquila chrysaetos
NCBI taxonomy Id: 223781
Other names: A. chrysaetos chrysaetos, Aquila chrysaetos chrysaetos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.