STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GASK1BGolgi associated kinase 1B. (246 aa)    
Predicted Functional Partners:
ARID4A
AT-rich interaction domain 4A.
      
 0.573
ARID4B
AT-rich interaction domain 4B.
      
 0.573
SALL4
Spalt like transcription factor 4.
      
 0.527
IRX3
Iroquois homeobox 3.
      
 0.485
LRRC3B
Leucine rich repeat containing 3B.
      
 0.478
MRVI1
Murine retrovirus integration site 1 homolog.
      
 0.433
USH1C
USH1 protein network component harmonin.
      
 0.404
USH2A
Usherin.
    
 
 0.400
Your Current Organism:
Aquila chrysaetos
NCBI taxonomy Id: 223781
Other names: A. chrysaetos chrysaetos, Aquila chrysaetos chrysaetos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.