STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC22ASEC22 homolog A, vesicle trafficking protein. (308 aa)    
Predicted Functional Partners:
BET1
Bet1 golgi vesicular membrane trafficking protein.
   
 0.971
GOSR2
Golgi SNAP receptor complex member 2.
    
 0.970
RPS6KC1
Ribosomal protein S6 kinase C1.
   
 0.967
VTI1A
Vesicle transport through interaction with t-SNAREs 1A.
   
 0.964
GOSR1
Golgi SNAP receptor complex member 1.
    
 0.963
YKT6
YKT6 v-SNARE homolog.
    
 0.962
STX6
Syntaxin 6.
    
 0.960
STX18
Syntaxin 18.
   
 0.948
SCFD1
Sec1 family domain containing 1.
   
 0.944
ENSACCP00020014895
annotation not available
    
 0.942
Your Current Organism:
Aquila chrysaetos
NCBI taxonomy Id: 223781
Other names: A. chrysaetos chrysaetos, Aquila chrysaetos chrysaetos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.