STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBE3DUbiquitin protein ligase E3D. (391 aa)    
Predicted Functional Partners:
ENSACCP00020011840
annotation not available
    
 0.862
ENSACCP00020018151
annotation not available
    
 0.862
ENSACCP00020018431
annotation not available
    
 0.862
ENSACCP00020018704
annotation not available
    
 0.862
ENSACCP00020018796
annotation not available
    
 0.862
CPSF3
Cleavage and polyadenylation specific factor 3.
    
 
 0.858
LOC115337820
E3 ubiquitin-protein ligase RBBP6-like.
    
 0.843
CPSF2
Cleavage and polyadenylation specific factor 2.
    
 
 0.646
UBE2C
Ubiquitin conjugating enzyme E2 C.
    
 
 0.645
DCLRE1A
DNA cross-link repair 1A.
    
 
 0.526
Your Current Organism:
Aquila chrysaetos
NCBI taxonomy Id: 223781
Other names: A. chrysaetos chrysaetos, Aquila chrysaetos chrysaetos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.