STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHRAC1Chromatin accessibility complex subunit 1. (135 aa)    
Predicted Functional Partners:
POLE3
DNA polymerase epsilon 3, accessory subunit.
    
 0.998
BAZ1A
Bromodomain adjacent to zinc finger domain 1A.
    
 0.990
SMARCA5
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.
    
 0.965
SMARCA1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1.
    
 0.965
NFYB
Nuclear transcription factor Y subunit beta.
   
 0.964
NFYA
Nuclear transcription factor Y subunit alpha.
    
 0.963
BAZ1B
Bromodomain adjacent to zinc finger domain 1B.
    
 0.952
RSF1
Remodeling and spacing factor 1.
     
 0.949
CECR2
CECR2 histone acetyl-lysine reader.
    
 0.931
BAZ2B
Bromodomain adjacent to zinc finger domain 2B.
    
 0.928
Your Current Organism:
Aquila chrysaetos
NCBI taxonomy Id: 223781
Other names: A. chrysaetos chrysaetos, Aquila chrysaetos chrysaetos
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