STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RHOT1Ras homolog family member T1. (707 aa)    
Predicted Functional Partners:
PRKN
Parkin RBR E3 ubiquitin protein ligase.
    
 0.952
NME8
NME/NM23 family member 8.
  
  0.937
PINK1
PTEN induced kinase 1.
    
 0.929
ITSN2
Intersectin 2.
    
 0.901
ITSN1
Intersectin 1.
    
 0.864
TRAK1
Trafficking kinesin protein 1.
    
 0.861
ENSACCP00020004561
annotation not available
   
 0.853
TRAK2
Trafficking kinesin protein 2.
    
 0.829
TOMM20
Translocase of outer mitochondrial membrane 20.
    
 0.823
RHOT2
Ras homolog family member T2.
  
  
 
0.818
Your Current Organism:
Aquila chrysaetos
NCBI taxonomy Id: 223781
Other names: A. chrysaetos chrysaetos, Aquila chrysaetos chrysaetos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.