STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSR1TSR1 ribosome maturation factor. (810 aa)    
Predicted Functional Partners:
LTV1
LTV1 ribosome biogenesis factor.
   
 0.999
RRP12
Ribosomal RNA processing 12 homolog.
   
 0.999
BYSL
Bystin like.
   
 0.999
DIMT1
DIMT1 rRNA methyltransferase and ribosome maturation factor.
   
 0.999
NOB1
NIN1 (RPN12) binding protein 1 homolog.
   
 0.999
RPS7
Ribosomal protein S7.
    
  0.998
IMP3
IMP U3 small nucleolar ribonucleoprotein 3.
   
 0.998
RPS6
Ribosomal protein S6.
    
  0.998
ENSACCP00020020269
annotation not available
    
 0.998
NAT10
N-acetyltransferase 10.
   
 0.998
Your Current Organism:
Aquila chrysaetos
NCBI taxonomy Id: 223781
Other names: A. chrysaetos chrysaetos, Aquila chrysaetos chrysaetos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.