STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZSWIM1Zinc finger SWIM-type containing 1. (444 aa)    
Predicted Functional Partners:
ARID4A
AT-rich interaction domain 4A.
   
 0.970
ARID4B
AT-rich interaction domain 4B.
   
 0.970
MEAF6
MYST/Esa1 associated factor 6.
    
 0.865
TRRAP
Transformation/transcription domain associated protein.
   
 0.858
DMAP1
DNA methyltransferase 1 associated protein 1.
   
 0.843
ACTL6A
Actin like 6A.
    
 0.803
VPS72
Vacuolar protein sorting 72 homolog.
    
 0.735
EPC1
Enhancer of polycomb homolog 1.
    
 0.735
EPC2
Enhancer of polycomb homolog 2.
    
 0.735
RUVBL1
RuvB like AAA ATPase 1.
    
 0.728
Your Current Organism:
Aquila chrysaetos
NCBI taxonomy Id: 223781
Other names: A. chrysaetos chrysaetos, Aquila chrysaetos chrysaetos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.