STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTRH2peptidyl-tRNA hydrolase 2. (180 aa)    
Predicted Functional Partners:
GATB
glutamyl-tRNA amidotransferase subunit B.
    
  0.830
USP30
Ubiquitin specific peptidase 30.
    
  0.667
NUP155
Nucleoporin 155.
    
  0.608
TOMM20
Translocase of outer mitochondrial membrane 20.
   
 
 0.608
ENSACCP00020004711
annotation not available
    
  0.596
FKBP8
FKBP prolyl isomerase 8.
    
  0.596
LOC115333362
Uncharacterized LOC115333362.
   
 
 0.593
RHOT1
Ras homolog family member T1.
    
  0.589
CFAP70
Cilia and flagella associated protein 70.
    
  0.589
RHOT2
Ras homolog family member T2.
    
  0.589
Your Current Organism:
Aquila chrysaetos
NCBI taxonomy Id: 223781
Other names: A. chrysaetos chrysaetos, Aquila chrysaetos chrysaetos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.