STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRKD3Protein kinase D3. (890 aa)    
Predicted Functional Partners:
CREB1
cAMP responsive element binding protein 1.
     
 0.775
CREB5
cAMP responsive element binding protein 5.
     
 0.775
ATF2
Activating transcription factor 2.
     
 0.654
LOC115351160
Cyclic AMP-dependent transcription factor ATF-7.
     
 0.654
RAP1A
RAP1A, member of RAS oncogene family.
     
 0.654
RAP1B
RAP1B, member of RAS oncogene family.
     
 0.654
ITGB1
Integrin subunit beta 1.
    
  0.586
ITGB2
Integrin subunit beta 2.
    
  0.586
ITGB7
Integrin subunit beta 7.
    
  0.586
ITGB3
Integrin subunit beta 3.
    
  0.577
Your Current Organism:
Aquila chrysaetos
NCBI taxonomy Id: 223781
Other names: A. chrysaetos chrysaetos, Aquila chrysaetos chrysaetos
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