STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GSDMEGasdermin E. (501 aa)    
Predicted Functional Partners:
ENSACCP00020009779
annotation not available
     
 0.671
CASP3
Caspase 3.
     
 0.671
ENSACCP00020005260
annotation not available
     
 0.602
LOC115339645
Cytochrome c.
     
 0.602
LOC115346730
Caspase-1-like.
     
 0.591
CASP7
Caspase 7.
     
 0.590
CENPU
Centromere protein U.
     
 0.584
ENSACCP00020011496
annotation not available
     
 0.564
HMGB2
High mobility group box 2.
     
 0.564
HMGB1
High mobility group box 1.
     
 0.564
Your Current Organism:
Aquila chrysaetos
NCBI taxonomy Id: 223781
Other names: A. chrysaetos chrysaetos, Aquila chrysaetos chrysaetos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.