STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEUROD4Neuronal differentiation 4. (331 aa)    
Predicted Functional Partners:
ENSACCP00020007971
annotation not available
    
 0.523
TCF12
Transcription factor 12.
    
 
 0.522
TCF4
Transcription factor 4.
    
 
 0.522
TCF3
Transcription factor 3.
    
 
 0.522
PAX6
Paired box 6.
   
 
 0.516
HES1
Hes family bHLH transcription factor 1.
    
 0.500
HES4
Hes family bHLH transcription factor 4.
    
 0.500
NKX2-2
NK2 homeobox 2.
   
 0.486
NEUROG1
Neurogenin 1.
     
0.411
Your Current Organism:
Aquila chrysaetos
NCBI taxonomy Id: 223781
Other names: A. chrysaetos chrysaetos, Aquila chrysaetos chrysaetos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.