STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMCO6Transmembrane and coiled-coil domains 6. (487 aa)    
Predicted Functional Partners:
KPNB1
Karyopherin subunit beta 1.
   
 0.880
CSE1L
Chromosome segregation 1 like.
   
 0.865
NUP153
Nucleoporin 153.
    
 0.731
NCBP1
Nuclear cap binding protein subunit 1.
   
 
 0.699
EXOSC10
Exosome component 10.
    
   0.661
ALS2
Alsin Rho guanine nucleotide exchange factor ALS2.
    
 
 0.654
NUP50
Nucleoporin 50.
   
 
 0.653
RANBP2
E3 SUMO-protein ligase RanBP2-like.
   
 0.649
SENP2
SUMO specific peptidase 2.
    
 
 0.634
SENP1
SUMO specific peptidase 1.
    
 
 0.634
Your Current Organism:
Aquila chrysaetos
NCBI taxonomy Id: 223781
Other names: A. chrysaetos chrysaetos, Aquila chrysaetos chrysaetos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.