STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115351944Lethal(3)malignant brain tumor-like protein 3. (709 aa)    
Predicted Functional Partners:
KDM2B
Lysine demethylase 2B.
    
 0.803
KDM2A
Lysine demethylase 2A.
    
 0.803
BARD1
BRCA1 associated RING domain 1.
    
  0.732
RB1
RB transcriptional corepressor 1.
    
 0.731
ENSACCP00020024610
annotation not available
   
 0.719
KDM6A
Lysine demethylase 6A.
    
 0.715
E2F5
E2F transcription factor 5.
    
 0.677
E2F4
E2F transcription factor 4.
    
 0.677
LIN52
Lin-52 DREAM MuvB core complex component.
     
 0.659
LIN54
Lin-54 DREAM MuvB core complex component.
   
 0.657
Your Current Organism:
Aquila chrysaetos
NCBI taxonomy Id: 223781
Other names: A. chrysaetos chrysaetos, Aquila chrysaetos chrysaetos
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