STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBR3Ubiquitin protein ligase E3 component n-recognin 3. (1865 aa)    
Predicted Functional Partners:
HECTD1
HECT domain E3 ubiquitin protein ligase 1.
   
  
 0.738
CUL5
Cullin 5.
   
    0.701
TRIP12
Thyroid hormone receptor interactor 12.
   
 
  0.628
OVOL2
Ovo like zinc finger 2.
    
 
 0.530
UBR7
Ubiquitin protein ligase E3 component n-recognin 7 (putative).
      
 0.526
ATE1
Arginyltransferase 1.
   
  
 0.495
UBE2B
Ubiquitin conjugating enzyme E2 B.
    
 
 0.466
UBE2A
Ubiquitin conjugating enzyme E2 A.
    
 
 0.466
ATMIN
ATM interactor.
      
 0.426
NTAN1
N-terminal asparagine amidase.
      
 0.414
Your Current Organism:
Aquila chrysaetos
NCBI taxonomy Id: 223781
Other names: A. chrysaetos chrysaetos, Aquila chrysaetos chrysaetos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.