STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLP1Cleavage and polyadenylation factor I subunit 1. (425 aa)    
Predicted Functional Partners:
PCF11
PCF11 cleavage and polyadenylation factor subunit.
    
 0.999
CSTF2
Cleavage stimulation factor subunit 2.
   
 0.995
CSTF3
Cleavage stimulation factor subunit 3.
    
 0.985
CPSF3
Cleavage and polyadenylation specific factor 3.
   
 0.985
TSEN2
tRNA splicing endonuclease subunit 2.
    
 0.982
CPSF2
Cleavage and polyadenylation specific factor 2.
   
 0.979
ZC3H3
Zinc finger CCCH-type containing 3.
    
 0.973
FIP1L1
Factor interacting with PAPOLA and CPSF1.
    
 0.972
TSEN54
tRNA splicing endonuclease subunit 54.
    
 0.968
LOC115336721
3'-5' RNA helicase YTHDC2.
   
 0.964
Your Current Organism:
Aquila chrysaetos
NCBI taxonomy Id: 223781
Other names: A. chrysaetos chrysaetos, Aquila chrysaetos chrysaetos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.