STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ISL1ISL LIM homeobox 1. (349 aa)    
Predicted Functional Partners:
LHX4
LIM homeobox 4.
   
0.853
LHX3
LIM homeobox 3.
   
0.853
LDB1
LIM domain binding 1.
    
 0.834
LDB2
LIM domain binding 2.
    
 0.812
ONECUT1
One cut homeobox 1.
    
 
 0.646
SRF
Serum response factor.
    
 0.569
GATA3
GATA binding protein 3.
   
 0.559
GATA2
GATA binding protein 2.
   
 0.554
ENSACCP00020010221
annotation not available
   
 0.547
ASCL1
Achaete-scute family bHLH transcription factor 1.
   
 0.546
Your Current Organism:
Aquila chrysaetos
NCBI taxonomy Id: 223781
Other names: A. chrysaetos chrysaetos, Aquila chrysaetos chrysaetos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.