STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHF12PHD finger protein 12. (1009 aa)    
Predicted Functional Partners:
ARID4A
AT-rich interaction domain 4A.
    
 0.999
ARID4B
AT-rich interaction domain 4B.
    
 0.999
ENSACCP00020002388
annotation not available
    
 0.998
SIN3A
SIN3 transcription regulator family member A.
   
 0.984
SIN3B
SIN3 transcription regulator family member B.
   
 0.984
SUDS3
SDS3 homolog, SIN3A corepressor complex component.
    
 0.977
RBBP4
RB binding protein 4, chromatin remodeling factor.
    
 0.971
RBBP7
RB binding protein 7, chromatin remodeling factor.
    
 0.971
BRMS1L
BRMS1 like transcriptional repressor.
    
 0.967
EMSY
EMSY transcriptional repressor, BRCA2 interacting.
   
 0.967
Your Current Organism:
Aquila chrysaetos
NCBI taxonomy Id: 223781
Other names: A. chrysaetos chrysaetos, Aquila chrysaetos chrysaetos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.