STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABCF1ATP binding cassette subfamily F member 1. (705 aa)    
Predicted Functional Partners:
RPL11
Ribosomal protein L11.
  
 0.969
RPL8
Ribosomal protein L8.
  
  0.947
ENSACCP00020002498
annotation not available
  
  0.932
ENSACCP00020019706
annotation not available
    
 0.910
RPL6
Ribosomal protein L6.
    
 0.892
RPS21
Ribosomal protein S21.
    
  0.891
ENSACCP00020020535
annotation not available
  
 0.889
ENSACCP00020020548
annotation not available
  
 0.889
MRPL20
Mitochondrial ribosomal protein L20.
  
 
 0.884
RPL38
Ribosomal protein L38.
    
  0.879
Your Current Organism:
Aquila chrysaetos
NCBI taxonomy Id: 223781
Other names: A. chrysaetos chrysaetos, Aquila chrysaetos chrysaetos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.