STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDLIM4PDZ and LIM domain 4. (331 aa)    
Predicted Functional Partners:
EHBP1
EH domain binding protein 1.
   
 0.944
MYO6
Myosin VI.
    
 0.931
KPTN
Kaptin, actin binding protein.
     
 0.921
APC
APC regulator of WNT signaling pathway.
    
  0.920
ENSACCP00020009852
annotation not available
     
0.919
PDLIM5
PDZ and LIM domain 5.
     
0.868
PDLIM3
PDZ and LIM domain 3.
     
0.864
PDLIM7
PDZ and LIM domain 7.
     
0.861
LDB3
LIM domain binding 3.
    
 
0.849
RAC3
Rac family small GTPase 3.
    
 0.832
Your Current Organism:
Aquila chrysaetos
NCBI taxonomy Id: 223781
Other names: A. chrysaetos chrysaetos, Aquila chrysaetos chrysaetos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.