STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF5E3 ubiquitin-protein ligase RNF5-like. (214 aa)    
Predicted Functional Partners:
DERL1
Derlin 1.
    
 0.813
CFTR
CF transmembrane conductance regulator.
    
 0.781
SEL1L
SEL1L adaptor subunit of ERAD E3 ubiquitin ligase.
     
 0.747
ENSACCP00020001572
annotation not available
    
 0.733
ERLIN1
ER lipid raft associated 1.
   
 0.731
ERLIN2
ER lipid raft associated 2.
   
 0.731
DERL3
Derlin 3.
    
 0.718
DERL2
Derlin 2.
    
 0.718
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.714
ENSACCP00020007631
annotation not available
    
  0.697
Your Current Organism:
Aquila chrysaetos
NCBI taxonomy Id: 223781
Other names: A. chrysaetos chrysaetos, Aquila chrysaetos chrysaetos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.