STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABCA1ATP binding cassette subfamily A member 1. (2258 aa)    
Predicted Functional Partners:
APOA1
Apolipoprotein A1.
    
 0.789
NR1H3
Nuclear receptor subfamily 1 group H member 3.
    
 0.730
ABCA3
ATP binding cassette subfamily A member 3.
  
 
0.641
ENSACCP00020002058
annotation not available
    
 0.590
IGBP1
Immunoglobulin binding protein 1.
    
 0.588
RXRG
Retinoid X receptor gamma.
    
  0.586
RXRA
Retinoid X receptor alpha.
    
  0.586
NR1H4
Nuclear receptor subfamily 1 group H member 4.
    
 0.540
LOC115334934
Bile acid receptor-like.
    
 0.531
ATP5F1A
ATP synthase F1 subunit alpha.
   
 
 0.523
Your Current Organism:
Aquila chrysaetos
NCBI taxonomy Id: 223781
Other names: A. chrysaetos chrysaetos, Aquila chrysaetos chrysaetos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.