ENSACCP00020024658 protein (Aquila chrysaetos)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSACCP00020024658

annotation not available (749 aa)

Predicted Functional Partners:

RASA1

0.967

RHOC

0.878

RHOA

0.878

RND3

0.864

RND1

0.847

RHOB

0.843

LOC115351391

0.842

SRC

0.807

ARHGAP5

0.776

RND2

0.773

Your Current Organism:

Aquila chrysaetos

NCBI taxonomy Id: 223781
Other names: A. chrysaetos chrysaetos, Aquila chrysaetos chrysaetos

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARHGAP5	ENSACCP00020024658	ENSACCP00020000863	ENSACCP00020024658	Rho GTPase activating protein 5.	annotation not available	0.776
ARHGAP5	LOC115351391	ENSACCP00020000863	ENSACCP00020015819	Rho GTPase activating protein 5.	Ras-like GTP-binding protein RHO.	0.873
ARHGAP5	RASA1	ENSACCP00020000863	ENSACCP00020020267	Rho GTPase activating protein 5.	RAS p21 protein activator 1.	0.905
ARHGAP5	RHOA	ENSACCP00020000863	ENSACCP00020019583	Rho GTPase activating protein 5.	Ras homolog family member A.	0.915
ARHGAP5	RHOB	ENSACCP00020000863	ENSACCP00020015814	Rho GTPase activating protein 5.	Ras homolog family member B.	0.870
ARHGAP5	RHOC	ENSACCP00020000863	ENSACCP00020016854	Rho GTPase activating protein 5.	Ras homolog family member C.	0.915
ARHGAP5	RND1	ENSACCP00020000863	ENSACCP00020011370	Rho GTPase activating protein 5.	Rho family GTPase 1.	0.806
ARHGAP5	RND2	ENSACCP00020000863	ENSACCP00020000798	Rho GTPase activating protein 5.	Rho family GTPase 2.	0.751
ARHGAP5	RND3	ENSACCP00020000863	ENSACCP00020006893	Rho GTPase activating protein 5.	Rho family GTPase 3.	0.832
ARHGAP5	SRC	ENSACCP00020000863	ENSACCP00020015269	Rho GTPase activating protein 5.	SRC proto-oncogene, non-receptor tyrosine kinase.	0.857
ENSACCP00020024658	ARHGAP5	ENSACCP00020024658	ENSACCP00020000863	annotation not available	Rho GTPase activating protein 5.	0.776
ENSACCP00020024658	LOC115351391	ENSACCP00020024658	ENSACCP00020015819	annotation not available	Ras-like GTP-binding protein RHO.	0.842
ENSACCP00020024658	RASA1	ENSACCP00020024658	ENSACCP00020020267	annotation not available	RAS p21 protein activator 1.	0.967
ENSACCP00020024658	RHOA	ENSACCP00020024658	ENSACCP00020019583	annotation not available	Ras homolog family member A.	0.878
ENSACCP00020024658	RHOB	ENSACCP00020024658	ENSACCP00020015814	annotation not available	Ras homolog family member B.	0.843
ENSACCP00020024658	RHOC	ENSACCP00020024658	ENSACCP00020016854	annotation not available	Ras homolog family member C.	0.878
ENSACCP00020024658	RND1	ENSACCP00020024658	ENSACCP00020011370	annotation not available	Rho family GTPase 1.	0.847
ENSACCP00020024658	RND2	ENSACCP00020024658	ENSACCP00020000798	annotation not available	Rho family GTPase 2.	0.773
ENSACCP00020024658	RND3	ENSACCP00020024658	ENSACCP00020006893	annotation not available	Rho family GTPase 3.	0.864
ENSACCP00020024658	SRC	ENSACCP00020024658	ENSACCP00020015269	annotation not available	SRC proto-oncogene, non-receptor tyrosine kinase.	0.807