Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFO88333.1 | SFO88358.1 | SAMN05216234_10184 | SAMN05216234_10185 | Predicted amidohydrolase. | Molybdopterin or thiamine biosynthesis adenylyltransferase. | 0.811 |
SFO88333.1 | xseB | SAMN05216234_10184 | SAMN05216234_10183 | Predicted amidohydrolase. | Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. | 0.809 |
SFO88358.1 | SFO88333.1 | SAMN05216234_10185 | SAMN05216234_10184 | Molybdopterin or thiamine biosynthesis adenylyltransferase. | Predicted amidohydrolase. | 0.811 |
SFO88358.1 | SFO88436.1 | SAMN05216234_10185 | SAMN05216234_10188 | Molybdopterin or thiamine biosynthesis adenylyltransferase. | Ankyrin repeat-containing protein. | 0.883 |
SFO88358.1 | SFP06758.1 | SAMN05216234_10185 | SAMN05216234_10594 | Molybdopterin or thiamine biosynthesis adenylyltransferase. | tRNA A37 threonylcarbamoyladenosine dehydratase. | 0.814 |
SFO88358.1 | SFP20179.1 | SAMN05216234_10185 | SAMN05216234_11013 | Molybdopterin or thiamine biosynthesis adenylyltransferase. | Cysteine desulfurase. | 0.954 |
SFO88358.1 | SFP64573.1 | SAMN05216234_10185 | SAMN05216234_13012 | Molybdopterin or thiamine biosynthesis adenylyltransferase. | Molybdopterin synthase catalytic subunit. | 0.979 |
SFO88358.1 | SFP64600.1 | SAMN05216234_10185 | SAMN05216234_13013 | Molybdopterin or thiamine biosynthesis adenylyltransferase. | Molybdopterin synthase sulfur carrier subunit. | 0.983 |
SFO88358.1 | SFP90506.1 | SAMN05216234_10185 | SAMN05216234_1557 | Molybdopterin or thiamine biosynthesis adenylyltransferase. | Sulfur carrier protein. | 0.993 |
SFO88358.1 | thiC | SAMN05216234_10185 | SAMN05216234_101128 | Molybdopterin or thiamine biosynthesis adenylyltransferase. | Hydroxymethylpyrimidine synthase; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. | 0.831 |
SFO88358.1 | thiG | SAMN05216234_10185 | SAMN05216234_1404 | Molybdopterin or thiamine biosynthesis adenylyltransferase. | Thiazole-phosphate synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.985 |
SFO88358.1 | xseB | SAMN05216234_10185 | SAMN05216234_10183 | Molybdopterin or thiamine biosynthesis adenylyltransferase. | Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. | 0.808 |
SFO88436.1 | SFO88358.1 | SAMN05216234_10188 | SAMN05216234_10185 | Ankyrin repeat-containing protein. | Molybdopterin or thiamine biosynthesis adenylyltransferase. | 0.883 |
SFO88436.1 | SFP20179.1 | SAMN05216234_10188 | SAMN05216234_11013 | Ankyrin repeat-containing protein. | Cysteine desulfurase. | 0.483 |
SFP06758.1 | SFO88358.1 | SAMN05216234_10594 | SAMN05216234_10185 | tRNA A37 threonylcarbamoyladenosine dehydratase. | Molybdopterin or thiamine biosynthesis adenylyltransferase. | 0.814 |
SFP06758.1 | SFP20179.1 | SAMN05216234_10594 | SAMN05216234_11013 | tRNA A37 threonylcarbamoyladenosine dehydratase. | Cysteine desulfurase. | 0.674 |
SFP06758.1 | SFP64600.1 | SAMN05216234_10594 | SAMN05216234_13013 | tRNA A37 threonylcarbamoyladenosine dehydratase. | Molybdopterin synthase sulfur carrier subunit. | 0.651 |
SFP06758.1 | SFP90506.1 | SAMN05216234_10594 | SAMN05216234_1557 | tRNA A37 threonylcarbamoyladenosine dehydratase. | Sulfur carrier protein. | 0.708 |
SFP06758.1 | thiG | SAMN05216234_10594 | SAMN05216234_1404 | tRNA A37 threonylcarbamoyladenosine dehydratase. | Thiazole-phosphate synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.661 |
SFP20179.1 | SFO88358.1 | SAMN05216234_11013 | SAMN05216234_10185 | Cysteine desulfurase. | Molybdopterin or thiamine biosynthesis adenylyltransferase. | 0.954 |
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