STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP01996.1Hypothetical protein. (109 aa)    
Predicted Functional Partners:
SFP18652.1
Addiction module antitoxin, RelB/DinJ family.
  
 
 0.897
SFO96999.1
Hypothetical protein.
   
 
 0.808
SFP01961.1
Hypothetical protein.
       0.773
SFP25024.1
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
   
 
 0.617
SFP43034.1
Antitoxin YefM; Antitoxin component of a type II toxin-antitoxin (TA) system.
   
 
 0.617
SFP74071.1
Antitoxin YefM; Antitoxin component of a type II toxin-antitoxin (TA) system.
   
 
 0.617
SFP63606.1
Protein of unknown function.
  
     0.479
SFP73080.1
Cold shock protein, CspA family.
 
   
 0.448
SFP01900.1
SNF2 family N-terminal domain-containing protein.
 
     0.407
SFP01942.1
Hypothetical protein.
       0.407
Your Current Organism:
Hydrogenimonas thermophila
NCBI taxonomy Id: 223786
Other names: ATCC BAA-737, H. thermophila, Hydrogenimonas thermophila Takai et al. 2004, JCM 11971, strain EP1-55-1%
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.