STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP05123.1Hypothetical protein. (175 aa)    
Predicted Functional Partners:
SFP05063.1
General secretion pathway protein D.
       0.809
SFP05088.1
Type II secretion system protein C.
       0.809
SFP05174.1
Hypothetical protein.
       0.807
SFP05202.1
Hypothetical protein.
       0.807
SFP04990.1
Prepilin-type N-terminal cleavage/methylation domain-containing protein.
       0.787
SFP05035.1
General secretion pathway protein E.
       0.779
SFP05015.1
Prepilin-type N-terminal cleavage/methylation domain-containing protein.
       0.773
SFP05148.1
Hypothetical protein.
       0.773
SFP05234.1
Cache domain-containing protein.
       0.536
hisH
Imidazole glycerol phosphate synthase subunit hisH; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.
       0.516
Your Current Organism:
Hydrogenimonas thermophila
NCBI taxonomy Id: 223786
Other names: ATCC BAA-737, H. thermophila, Hydrogenimonas thermophila Takai et al. 2004, JCM 11971, strain EP1-55-1%
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