STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP06095.1Prepilin-type N-terminal cleavage/methylation domain-containing protein. (296 aa)    
Predicted Functional Partners:
SFP06118.1
Prepilin-type N-terminal cleavage/methylation domain-containing protein.
       0.782
SFP06148.1
Hypothetical protein.
       0.773
SFP06047.1
Hypothetical protein.
       0.772
SFP05035.1
General secretion pathway protein E.
  
 0.650
SFP13341.1
General secretion pathway protein E.
  
 0.650
SFP52464.1
General secretion pathway protein E/type IV pilus assembly protein PilB.
  
 0.650
SFP06022.1
Putative sigma-54 modulation protein.
       0.608
SFP66191.1
Putative hydrolases of HD superfamily.
  
  
 0.539
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
     
 0.520
fliW
Flagellar assembly factor FliW; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum.
       0.490
Your Current Organism:
Hydrogenimonas thermophila
NCBI taxonomy Id: 223786
Other names: ATCC BAA-737, H. thermophila, Hydrogenimonas thermophila Takai et al. 2004, JCM 11971, strain EP1-55-1%
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.