Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFP03203.1 | SFP09977.1 | SAMN05216234_104122 | SAMN05216234_10643 | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Methyltransferase domain-containing protein. | 0.593 |
SFP03203.1 | glyA | SAMN05216234_104122 | SAMN05216234_10630 | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.820 |
SFP09819.1 | SFP09849.1 | SAMN05216234_10638 | SAMN05216234_10639 | Hypothetical protein. | Hypothetical protein. | 0.809 |
SFP09819.1 | SFP09882.1 | SAMN05216234_10638 | SAMN05216234_10640 | Hypothetical protein. | Hypothetical protein. | 0.782 |
SFP09819.1 | SFP09977.1 | SAMN05216234_10638 | SAMN05216234_10643 | Hypothetical protein. | Methyltransferase domain-containing protein. | 0.741 |
SFP09819.1 | coaX | SAMN05216234_10638 | SAMN05216234_10641 | Hypothetical protein. | Pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis. | 0.782 |
SFP09819.1 | gatC | SAMN05216234_10638 | SAMN05216234_10637 | Hypothetical protein. | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family. | 0.593 |
SFP09819.1 | hisG | SAMN05216234_10638 | SAMN05216234_10642 | Hypothetical protein. | ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Short subfamily. | 0.782 |
SFP09849.1 | SFP09819.1 | SAMN05216234_10639 | SAMN05216234_10638 | Hypothetical protein. | Hypothetical protein. | 0.809 |
SFP09849.1 | SFP09882.1 | SAMN05216234_10639 | SAMN05216234_10640 | Hypothetical protein. | Hypothetical protein. | 0.782 |
SFP09849.1 | SFP09977.1 | SAMN05216234_10639 | SAMN05216234_10643 | Hypothetical protein. | Methyltransferase domain-containing protein. | 0.741 |
SFP09849.1 | coaX | SAMN05216234_10639 | SAMN05216234_10641 | Hypothetical protein. | Pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis. | 0.782 |
SFP09849.1 | gatC | SAMN05216234_10639 | SAMN05216234_10637 | Hypothetical protein. | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family. | 0.593 |
SFP09849.1 | hisG | SAMN05216234_10639 | SAMN05216234_10642 | Hypothetical protein. | ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Short subfamily. | 0.782 |
SFP09882.1 | SFP09819.1 | SAMN05216234_10640 | SAMN05216234_10638 | Hypothetical protein. | Hypothetical protein. | 0.782 |
SFP09882.1 | SFP09849.1 | SAMN05216234_10640 | SAMN05216234_10639 | Hypothetical protein. | Hypothetical protein. | 0.782 |
SFP09882.1 | SFP09977.1 | SAMN05216234_10640 | SAMN05216234_10643 | Hypothetical protein. | Methyltransferase domain-containing protein. | 0.775 |
SFP09882.1 | coaX | SAMN05216234_10640 | SAMN05216234_10641 | Hypothetical protein. | Pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis. | 0.809 |
SFP09882.1 | gatC | SAMN05216234_10640 | SAMN05216234_10637 | Hypothetical protein. | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family. | 0.578 |
SFP09882.1 | hisG | SAMN05216234_10640 | SAMN05216234_10642 | Hypothetical protein. | ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Short subfamily. | 0.809 |
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