STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP20933.1Hypothetical protein. (69 aa)    
Predicted Functional Partners:
SFP01003.1
Flagellar motor switch protein FliN/FliY.
    
 
 0.928
SFP12952.1
Flagellar protein FliS.
    
 
 0.646
SFP20954.1
Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contain LysM domain.
     
 0.612
SFP09254.1
Flagellar motor switch protein FliN/FliY.
    
   0.603
SFP26411.1
ABC-type uncharacterized transport system, auxiliary component.
   
    0.465
Your Current Organism:
Hydrogenimonas thermophila
NCBI taxonomy Id: 223786
Other names: ATCC BAA-737, H. thermophila, Hydrogenimonas thermophila Takai et al. 2004, JCM 11971, strain EP1-55-1%
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.