STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP25287.1Dolichyl-phosphate-mannose-protein mannosyltransferase. (492 aa)    
Predicted Functional Partners:
SFP25213.1
Dolichol-phosphate mannosyltransferase.
 
 
 0.957
SFP25239.1
4-amino-4-deoxy-L-arabinose transferase.
 
     0.928
SFP25176.1
Hypothetical protein.
 
  
 0.862
SFP25263.1
UDPglucose 6-dehydrogenase.
  
  
 0.801
lpxK
lipid-A-disaccharide kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).
 
  
 0.543
SFP37981.1
TIGR01244 family protein.
  
     0.525
SFP89797.1
KDO2-lipid IV(A) lauroyltransferase.
    
 0.522
SFO87178.1
Glycosyltransferase involved in cell wall bisynthesis.
  
 
 0.511
SFO93812.1
Glycosyl transferase family 2.
  
 
 0.511
SFO91858.1
Glycosyl transferase family 2.
  
 
 0.511
Your Current Organism:
Hydrogenimonas thermophila
NCBI taxonomy Id: 223786
Other names: ATCC BAA-737, H. thermophila, Hydrogenimonas thermophila Takai et al. 2004, JCM 11971, strain EP1-55-1%
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.