STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP32194.1Diguanylate cyclase (GGDEF) domain-containing protein. (675 aa)    
Predicted Functional Partners:
SFP32945.1
Response regulator receiver domain-containing protein.
  
 0.984
SFP51009.1
PAS domain S-box-containing protein.
 
 0.982
SFP44152.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
0.981
SFP67428.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 0.979
SFP03076.1
ABC-type nitrate/sulfonate/bicarbonate transport system, substrate-binding protein.
 
 
 0.978
SFP03142.1
Polar amino acid transport system substrate-binding protein.
 
 
 0.978
SFP80115.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 0.963
SFP06297.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 0.953
SFO92105.1
PAS domain S-box-containing protein.
 
 
 0.945
SFP52692.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
0.945
Your Current Organism:
Hydrogenimonas thermophila
NCBI taxonomy Id: 223786
Other names: ATCC BAA-737, H. thermophila, Hydrogenimonas thermophila Takai et al. 2004, JCM 11971, strain EP1-55-1%
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