STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP41678.1Transposase DDE domain-containing protein. (182 aa)    
Predicted Functional Partners:
SFP41723.1
Transposase DDE domain-containing protein.
     0.944
SFP18130.1
Transposase, IS4 family.
  
     0.743
SFP32123.1
Transposase DDE domain-containing protein.
  
     0.614
SFP67390.1
Transposase DDE domain-containing protein.
  
     0.614
SFP90345.1
Transposase DDE domain-containing protein.
  
     0.614
SFP32155.1
Transposase DDE domain-containing protein.
  
     0.550
SFP67353.1
Transposase DDE domain-containing protein.
  
     0.550
SFP90318.1
Transposase DDE domain-containing protein.
  
     0.550
SFP41623.1
Helix-turn-helix domain-containing protein.
       0.533
SFQ03322.1
DDE_Tnp_1-associated.
  
     0.497
Your Current Organism:
Hydrogenimonas thermophila
NCBI taxonomy Id: 223786
Other names: ATCC BAA-737, H. thermophila, Hydrogenimonas thermophila Takai et al. 2004, JCM 11971, strain EP1-55-1%
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.