STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP43443.1Hypothetical protein. (169 aa)    
Predicted Functional Partners:
SFP43470.1
Hypothetical protein.
 
     0.823
SFP87746.1
Nitrous oxide reductase accessory protein NosL.
 
     0.733
SFP87842.1
Hypothetical protein.
 
     0.724
SFP28000.1
Ferredoxin-thioredoxin reductase, catalytic subunit.
  
     0.675
SFP87795.1
ABC-type transport system, involved in lipoprotein release, permease component.
 
     0.639
SFP43392.1
Hypothetical protein.
       0.636
SFP43416.1
Hypothetical protein.
       0.636
SFP53170.1
Ubiquinol-cytochrome c reductase cytochrome c1 subunit.
  
     0.580
SFP76330.1
FmdE, Molybdenum formylmethanofuran dehydrogenase operon.
  
     0.560
SFO92898.1
Histidyl-tRNA synthetase.
  
     0.550
Your Current Organism:
Hydrogenimonas thermophila
NCBI taxonomy Id: 223786
Other names: ATCC BAA-737, H. thermophila, Hydrogenimonas thermophila Takai et al. 2004, JCM 11971, strain EP1-55-1%
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.