STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP45052.1Anaerobic selenocysteine-containing dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (581 aa)    
Predicted Functional Partners:
SFP95729.1
Nitrate reductase (quinol-dependent), transmembrane subunit.
 
 0.992
SFO92264.1
Periplasmic nitrate reductase subunit NapG.
  
 0.960
SFO92320.1
Periplasmic nitrate reductase subunit NapB.
 
 0.952
SFP22686.1
Hypothetical protein.
   
 0.948
tuf
Translation elongation factor 1A (EF-1A/EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 
 0.913
SFP21106.1
Prokaryotic molybdopterin-containing oxidoreductase family, membrane subunit.
  
 0.896
SFO89024.1
Fe-S-cluster-containing dehydrogenase component.
 
 0.889
SFP08978.1
Glutamate synthase (NADPH/NADH) large chain.
  
 0.889
SFP21016.1
Fe-S-cluster-containing dehydrogenase component.
  
 0.889
SFP21084.1
Fe-S-cluster-containing dehydrogenase component.
  
 0.889
Your Current Organism:
Hydrogenimonas thermophila
NCBI taxonomy Id: 223786
Other names: ATCC BAA-737, H. thermophila, Hydrogenimonas thermophila Takai et al. 2004, JCM 11971, strain EP1-55-1%
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