STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP52763.1Hypothetical protein. (155 aa)    
Predicted Functional Partners:
SFP52854.1
Right handed beta helix region.
       0.790
SFP52793.1
Prepilin-type N-terminal cleavage/methylation domain-containing protein.
       0.782
SFP52823.1
Hypothetical protein.
       0.782
SFP52738.1
Prepilin-type N-terminal cleavage/methylation domain-containing protein.
       0.774
SFP52692.1
Diguanylate cyclase (GGDEF) domain-containing protein.
       0.686
SFP52887.1
16S rRNA (uracil1498-N3)-methyltransferase; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.
       0.578
SFP52922.1
Putative restriction endonuclease.
       0.562
SFP52952.1
Hypothetical protein.
       0.535
SFP52657.1
Hypothetical protein.
       0.477
SFP52596.1
Hypothetical protein.
       0.473
Your Current Organism:
Hydrogenimonas thermophila
NCBI taxonomy Id: 223786
Other names: ATCC BAA-737, H. thermophila, Hydrogenimonas thermophila Takai et al. 2004, JCM 11971, strain EP1-55-1%
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.