STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP60493.1Hypothetical protein. (80 aa)    
Predicted Functional Partners:
SFP60538.1
Phage P2 baseplate assembly protein gpV.
       0.773
SFP60574.1
Hypothetical protein.
       0.773
SFP60616.1
Mu-like prophage I protein.
       0.773
SFP60661.1
Mu-like prophage major head subunit gpT.
       0.773
SFP60692.1
Hypothetical protein.
       0.515
SFP60717.1
Hypothetical protein.
       0.515
SFP60750.1
Putative ATPase subunit of terminase (gpP-like).
       0.515
SFP60802.1
Phage uncharacterized protein (putative large terminase), C-terminal domain-containing protein.
       0.515
SFP60412.1
Baseplate J-like protein.
       0.506
SFP60456.1
Hypothetical protein.
       0.506
Your Current Organism:
Hydrogenimonas thermophila
NCBI taxonomy Id: 223786
Other names: ATCC BAA-737, H. thermophila, Hydrogenimonas thermophila Takai et al. 2004, JCM 11971, strain EP1-55-1%
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.