STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP63015.1TonB family C-terminal domain-containing protein. (309 aa)    
Predicted Functional Partners:
SFP04904.1
Iron complex outermembrane recepter protein.
  
 
 0.968
SFP01539.1
Biopolymer transport protein ExbD.
  
 
 0.921
SFP69225.1
Biopolymer transport protein ExbD.
  
 
 0.913
SFP70684.1
Cell division and transport-associated protein TolR.
  
 
 0.913
SFP01520.1
Biopolymer transport protein ExbB.
  
 
 0.858
SFP69186.1
Biopolymer transport protein ExbB.
  
 
 0.851
SFP70650.1
MotA/TolQ/ExbB proton channel family protein.
  
 
 0.851
SFO93051.1
Iron complex outermembrane recepter protein.
   
 
 0.841
SFP69013.1
Iron complex outermembrane recepter protein.
   
 
 0.841
SFP70766.1
TolB protein.
   
 
 0.826
Your Current Organism:
Hydrogenimonas thermophila
NCBI taxonomy Id: 223786
Other names: ATCC BAA-737, H. thermophila, Hydrogenimonas thermophila Takai et al. 2004, JCM 11971, strain EP1-55-1%
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.