STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP81007.1Predicted ATP-binding protein involved in virulence. (437 aa)    
Predicted Functional Partners:
SFP81039.1
TIGR02646 family protein.
     
 0.810
SFP81064.1
Hypothetical protein.
       0.757
SFP81084.1
Hypothetical protein.
       0.757
SFP81110.1
Hypothetical protein.
       0.757
SFP81132.1
Uncharacterized protein YydD, contains DUF2326 domain.
       0.757
SFP44996.1
TIGR02646 family protein.
 
   
 0.754
SFP13680.1
Predicted ATPase.
 
     0.566
SFP80982.1
Hypothetical protein.
       0.528
SFP44230.1
Hypothetical protein.
  
     0.478
SFP43221.1
ATPase/GTPase, AAA15 family.
  
     0.445
Your Current Organism:
Hydrogenimonas thermophila
NCBI taxonomy Id: 223786
Other names: ATCC BAA-737, H. thermophila, Hydrogenimonas thermophila Takai et al. 2004, JCM 11971, strain EP1-55-1%
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.